One Novel Ag(I) Compound Generated from Double Schiff-base Ligand with Quinoxaline-N-oxide as Terminal Binding Sites

Dong-Xiao WANG Peng WANG Jun-Yan CHENG

Citation:  Dong-Xiao WANG, Peng WANG, Jun-Yan CHENG. One Novel Ag(I) Compound Generated from Double Schiff-base Ligand with Quinoxaline-N-oxide as Terminal Binding Sites[J]. Chinese Journal of Structural Chemistry, 2021, 40(3): 301-305. doi: 10.14102/j.cnki.0254–5861.2011–2843 shu

One Novel Ag(I) Compound Generated from Double Schiff-base Ligand with Quinoxaline-N-oxide as Terminal Binding Sites

English

  • In the past few decades, discrete coordination compounds and coordination polymers based on polydentate organic ligands have attracted wide attention due to their novel structural topologies and properties[1-4]. To date, the length, shape, conformation and coordinating orientation of organic ligands are dominant in affecting the structures of coordination molecular aggregates[5]. Besides the ligand, the characteristics of counterions for instance charge, size, geometry and solvent templating effects imply that the polyatomic counterions and solvent intermedia play important roles in the self-assembly of functional coordination compounds[6-9]. In the previous work of our task force, we have been exploring the metal-organic coordinated compounds based on the double Schiff-base ligands[10-13]. The results show that such types of ligands are very useful to construct novel polymeric and discrete compounds due to their chelated coordination model between the spacer moiety (-RC=N-N=CR-) and the terminal coordination groups. The heteroatom on the ligand ending groups (pyridine, pyrazine, and N, N΄-dioxide quinoxaline) can be used not only as coordination atoms, but also as potential hydrogen bond acceptor to form hydrogen bonds with solvent molecules or counterions. These hydrogen bonds can further link the secondary building blocks (Ag2L2 or Ag3L3) into twoor three-dimensional novel topological structures. Pursuing our research in this area, we describe here the coordination chemistry of the double Schiff-base ligand 3, 6-bis[2-(4-oxidequinoxaline)-yl]-4, 5-diaza-3, 5-octadiene (L) with AgClO4. In our previous work, the ligand reacted with AgSbF6, AgPF6 and AgBF4 to obtain a polymer with a three-dimensional network structure and two discrete macromolecules[14, 15]. The results showed that the template effect of anions may be responsible for the formation of compounds with different dimensions. Based on the above reasons, we replaced the silver salt with AgClO4 and obtained a special [Ag3L3]3+ crown-like trimer different from the previous compounds. There are complex hydrogen bond systems[16, 17] in this compound based on ClO4 anions, solvent molecules and discrete molecular building blocks. These hydrogen bonds further linked these discrete molecules to form a threedimensional network structure with hexagonal tunnels.

    AgClO4 (Acros) was used as obtained without further purification. The ligand L was synthesized according to the literature[14]. Infrared (IR) samples were prepared as KBr pellets, and spectra were obtained in the 400~4000 cm–1 range using a Perkin-Elmer 1600 FT-IR spectrometer. Elemental analyses were performed on a Perkin-Elmer model 2400 analyzer.

    Caution! The crystallization procedures involve AgClO4, which is a strong oxidizer and should be carefully operated.

    A CH3OH solution (8 mL) of AgClO4 (18.7 mg, 0.09 mmol) was slowly diffused into a CH2Cl2 solution (8 mL) of L (12.0 mg, 0.03 mmol). Yellow crystals formed in about 7 days in 54.6% yield (based on AgClO4). Anal. Calcd. for Ag3C75H93Cl9N18O25.50: C, 39.21; H, 4.08; N, 10.97. Found: C, 39.23; H, 4.01; N, 10.99. IR (KBr pellet, cm–1): 3417(s), 3123(s), 1638(w), 1578(w), 1492(w), 1401(s), 1249(w), 1216 (w), 1089(s), 938(w), 910(w), 857(w), 771(w), 622(w).

    Suitable single crystals of 1 were selected and mounted in air onto thin glass fibers. X-ray intensity data were measured at 173(2) K on a Bruker SMART APEX CCD-based diffractometer (Mo radiation, λ = 0.71073 Å). The raw frame data for 1 were integrated into SHELX-format reflection files and corrected for Lorentz and polarization effects using SAINT[18, 19]. Corrections for incident and diffracted beam adsorption effects were applied using SADABS. None of the crystals showed evidence of crystal decay during data collection. The structure was solved by a combination of direct methods and difference Fourier syntheses and structural analysis refined against F2 by the full-matrix least-squares technique. Relevant interatomic bond distances and bond angles for 1 are given in Tables 1 and 2.

    Table 1

    Table 1.  Selected Bond Lengths (Å) and Bond Angles (°)
    DownLoad: CSV
    Bond Dist. Bond Dist.
    Ag(1)−N(1) 2.315(6) Ag(1)−N(3) 2.365(6)
    Ag(1)−N(3)i 2.365(6) Ag(1)−N(1)i 2.315(6)
    Angle (°) Angle (°)
    N(1)−Ag(1)−N(1)i 123.3(3) N(1)−Ag(1)−N(3) 69.9(2)
    N(1)i−Ag(1)−N(3) 130.2(2) N(1)−Ag(1)−N(3)i 130.2(2)
    N(1)i−Ag(1)−N(3)i 69.9(2) N(3)−Ag(1)−N(3)i 143.0(3)
    Symmetry code: i –x + 1, –y + 1, –z + 3/2

    Table 2

    Table 2.  Hydrogen Bond Lengths (Å) and Bond Angles (°)
    DownLoad: CSV
    D–H···A d(D–H) d(H···A) d(D···A) ∠DHA
    C(12)–H(12c)···O(1)vi 0.96 2.34 3.19(3) 146
    O(4)–H(4)···O(4)vii 0.85 2.01 2.74(2) 143
    C(7)–H(7)···O(2)vi 0.95 2.41 3.27(1) 121
    Symmetry codes: vi y, –x + y, –z + 1; viix + 1, –y + 1, –z + 1

    Compound 1 was found to crystallize in the space group trigonal, P-31c. Selected bond lengths and bond angles are shown in Table 1. X-ray single-crystal analysis revealed that there is only one type of crystallographic independent Ag(I) ion in 1 (Fig. 1). Each Ag(I) ion lies in a distorted tetrahedral coordination environment {AgN4} which consists of two quinoxaline N-donors and two Schiff-base N-donors from three four-coordinated ligands, respectively. The dihedral angle between two terminal benzene rings is 73.17°. Different from the dimer formed by the ligand and other silver salts (AgBF4 and AgPF6), the compound exhibits a triple-helical [Ag3L3]3+ crown-like trimer, in which three Ag(I) atoms form an equilateral triangle with Ag···Ag distance of 4.7 Å. In [Ag3L3]3+, the terminal quinoxaline moieties define the bowlike cavities above and below the Ag3 plane. The dihedral angle between two neighboring benzene planes on the same side is ca. 86.06°. The distance between the quinoxaline-N-oxide O-donors on the same side of the trisilver plane is 10.087 Å, and the shortest distance between Ag(I) and O-donor is 6.36 Å. As indicated in Fig. 2, two ClO4 anions locate in each trimer and attach to it through the weak interaction between Ag and O(3) with the distance of 3.07 Å. The other three O(2) atoms of one ClO4 anion act as hydrogen-bond acceptor to form the C–H···O hydrogenbonding system along the c axis. The template effect of ClO4 is the key to the formation of the [Ag3L3]3+ trimer. In the compounds formed by the ligand and other silver salts (AgBF4 and AgPF6), the distances between anions and silver centers are far, and there are no weak interactions between them.

    Figure 1

    Figure 1.  ORTEP figure of 1.

    Symmetry codes: ix + 1, –y + 1, –z + 3/2; iix + 1, –x + y + 1, z; iii xy, –y + 1, z; iv x, xy, –z + 3/2; vx + y + 1, y, –z + 3/2

    Figure 2

    Figure 2.  Weak interactions between Ag and O(3) (yellow dotted lines) and hydrogen-bonding systems (pink dotted lines) (dAg(1)···O(3) = 3.073 Å, dO(2)···H(7) = 2.411 Å, < C(7)–H(7) ···O(2) = 121°). Symmetry code: vi y, –x+y, –z+1

    Interestingly, there are two sets of crown complexes that are oriented in different directions in the solid state. Three neighboring [Ag3L3]3+ units with the same orientation surround disordered ClO4 anion to generate a cavity (Fig. 3). The remarkable feature of 1 is its hydrogen-bonding system. As shown in Fig. 3, there are two independent sets of O(4)–H(4)···O(4) and C(12)–H(12c)···O(1) interactions generated from methanol molecules or methanol and trimers. The hydroxyl groups on methanol molecules are linked to each other by O–H···O interactions which connect six methanol molecules into a hexamer methanol cluster. Six oxygen atoms are in the same plane with the O···O distance to be 2.74 Å. Methyl groups are located alternately above and below the plane and connected with the quinoxaline-N-oxide groups of the ligands through C–H···O interactions. Each solvent molecular cluster serves as the node to connect three [Ag3L3]3+ units in the upper and lower layer by hydrogen bonds. Furthermore, the crown subunits 2D layers are stacked ABAB along the c axis and joined together through interlayer O–H···O and C–H···O interactions to generate a 3D H-bonded framework. This compound is similar to the cascade structure we reported before[12]. Along the c axis, the compound is comparable to Russian Matroshka (nesting) dolls. Three [Ag3L3]3+ units host cage traps a methanol cluster gust, which further encapsulates disordered ClO4 counterions. Taken all together, the synergistic effect of the solventhydrogen-bonding interactions[20] results in the formation of a 3D framework (Fig. 4). However, in the compounds we have reported before, there are hydrogen bonds between anions and [Ag2L2]2+ units but the H-bonding interactions between [Ag2L2]2+ units are the driving force that makes the compounds extend into 1D or 2D structures in the space. In the solid state, the 3D H-bonded network exhibits a beautiful hexagon tunnel-type architecture (Fig. 4).

    Figure 3

    Figure 3.  2D hydrogen-bonded nets viewed down the b (a) and c (b) axes. The hydrogen bonds are shown as orange and blue dotted lines. (dO(1)···H(12c) = 2.341 Å, dO(4)···H(4) = 2.014 Å, < C(12)–H(12c)···O(1) = 146°, < O(4)–H(4)···O(4) = 143°).

    Symmetry codes: vi y, –x + y, –z + 1; viix + 1, –y + 1, –z + 1

    Figure 4

    Figure 4.  3D framework of 1. The hydrogen bonds are shown as blue dotted lines

    In summary, the double Schiff-base ligand L with N, N΄-dioxide quinoxaline as the terminal coordination group can be used as a polydentate or chelating ligand to coordinate transition metal ions. One novel discrete coordination compound with AgI centers has been obtained based on such ligand and further connected to a three-dimensional network under the action of hydrogen bonds. Compared with other Ag2L2 discrete compounds formed by the ligand and silver ions (AgPF6, AgBF4), the structure of anions, weak interaction between anions and metal centers play important roles in forming the triple-helical [Ag3L3]3+ crown-like trimer. The methanol solvent rings connected by hydrogen bonds further link these discrete molecules into a three-dimensional network structure.

    Scheme 1

    Scheme 1.  Schiff-base ligand used in the construction of coordination compounds

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  • Figure 1  ORTEP figure of 1.

    Symmetry codes: ix + 1, –y + 1, –z + 3/2; iix + 1, –x + y + 1, z; iii xy, –y + 1, z; iv x, xy, –z + 3/2; vx + y + 1, y, –z + 3/2

    Figure 2  Weak interactions between Ag and O(3) (yellow dotted lines) and hydrogen-bonding systems (pink dotted lines) (dAg(1)···O(3) = 3.073 Å, dO(2)···H(7) = 2.411 Å, < C(7)–H(7) ···O(2) = 121°). Symmetry code: vi y, –x+y, –z+1

    Figure 3  2D hydrogen-bonded nets viewed down the b (a) and c (b) axes. The hydrogen bonds are shown as orange and blue dotted lines. (dO(1)···H(12c) = 2.341 Å, dO(4)···H(4) = 2.014 Å, < C(12)–H(12c)···O(1) = 146°, < O(4)–H(4)···O(4) = 143°).

    Symmetry codes: vi y, –x + y, –z + 1; viix + 1, –y + 1, –z + 1

    Figure 4  3D framework of 1. The hydrogen bonds are shown as blue dotted lines

    Scheme 1  Schiff-base ligand used in the construction of coordination compounds

    Table 1.  Selected Bond Lengths (Å) and Bond Angles (°)

    Bond Dist. Bond Dist.
    Ag(1)−N(1) 2.315(6) Ag(1)−N(3) 2.365(6)
    Ag(1)−N(3)i 2.365(6) Ag(1)−N(1)i 2.315(6)
    Angle (°) Angle (°)
    N(1)−Ag(1)−N(1)i 123.3(3) N(1)−Ag(1)−N(3) 69.9(2)
    N(1)i−Ag(1)−N(3) 130.2(2) N(1)−Ag(1)−N(3)i 130.2(2)
    N(1)i−Ag(1)−N(3)i 69.9(2) N(3)−Ag(1)−N(3)i 143.0(3)
    Symmetry code: i –x + 1, –y + 1, –z + 3/2
    下载: 导出CSV

    Table 2.  Hydrogen Bond Lengths (Å) and Bond Angles (°)

    D–H···A d(D–H) d(H···A) d(D···A) ∠DHA
    C(12)–H(12c)···O(1)vi 0.96 2.34 3.19(3) 146
    O(4)–H(4)···O(4)vii 0.85 2.01 2.74(2) 143
    C(7)–H(7)···O(2)vi 0.95 2.41 3.27(1) 121
    Symmetry codes: vi y, –x + y, –z + 1; viix + 1, –y + 1, –z + 1
    下载: 导出CSV
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  • 发布日期:  2021-03-01
  • 收稿日期:  2020-04-09
  • 接受日期:  2020-06-18
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